I restarted, and using the programs default settings was able to find all the files once again. It seems as though changing the file types to be searched for effected the type of search, or perhaps I had unknowingly changed another setting. Anyway, I'm on hour 8.5 of transferring the readable files to another external HDD, I'm hoping it'll go faster once the drive is formatted and I need to put them back on the WD.
Thanks for the tip!
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